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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015796370.1_cds_XP_016449045.1_4292
CDS Infomation

[gene=LOC107774090] [db_xref=GeneID:107774090] [protein=probable LRR receptor-like serine/threonine-protein kinase At1g56140] [protein_id=XP_016449045.1] [location=join(13738..13888,18109..18286,18712..18783,18870..18941,19017..19088,19213..19284,20219..20290,20397..20468,20596..20667,20766..20837,20952..21023,21237..21308,21390..21455,21774..21839,21949..21993,22224..22288,22663..23039,23937..24135,24216..24380,24758..24876,25234..25444,25552..25783,25873..26023,26315..26686)] [gbkey=CDS]
Sequence

ATGAAGACGGCGGTGCCATGGACAATAAACGGAAGAGGATTTGGTTTAAGCTTCTACTCC
TCCGCCGTCATCGTCATGTTTAGTCTACTCGTGGAGATAGCTGTAGCTCAAAGAAACACA
ACCAATGTTGCCACCACTAATCCTCCTGAAGCCCGTGCTTTGAACTTCATCTTCCAAAAA
TGGGGAATTTCCGCGACAAATCGGTGGAACATTAGTGGTGAGTTATGCAGCGGAGCCGCC
ATTGATTCCACTGAAATCCAAGATTTTAATCCCGCCATCAAATGCGATTGTTCCGACAAC
AACCGCACTCTTTGTCATATCACTGGCTTGAGAGTTTATGCAATGAACGTCGTCAGTGAA
ATTCCAGATGAATTATGGAGCCTTAACTTCCTCAATGATCTGAATGTTGCCCAAAATTTC
TTAACAGGCACACTGTCCCCATCCATTGCCAATCTGACTCGCATGCAATGGCTAAGCATT
GGCATTAATGCTTTGTCAGGGGAGCTCCCAAAGGAACTTGGGTTGTTGACTGAATTAAAA
TCATTTGGTTTTGGCACAAACAATTTCTCTGGACCTCTGCCTTCAGAACTTGGAAACTTA
ACAAAAATGACACAAATTTATTTCGATAGTGCTGGTGTTAGTGGTCCAATACCATTGACG
TTTGCAAAACTGCAGAACTTGGATACAGTGTGGGCTGCAGATAATAATCTTACAGGAAGG
ATTCCTGATTTCATTGGAAGTTGGTCAAAGCTTACTACACTGAGGTTCCAAGGAAATTCT
TTCGAGGGCCCAATACCTGCTTCCTTTTCCAACTTAACCTCTTTGACCGACCTGAGAATA
AGTGATCTATCCAATGGGAGCTCTTCACTTGACTTCCTCAGGAATATGAAGTCTCTAAGC
AAGCTGGTTTTACGAAATAACAATATTTCAGGTTCCATCCCACCCAATATTGGAGAATAT
CAGAGCCTGTCACTACTGGATTTGAGCTTCAACAATTTGAGTGGGCGTATTCCAGATGCA
CTTTTCAATCTAAGTTCGCTGACTCACTTGTTTCTTGGTGATAACAAGCTAACAGGCGTC
CTGCCAGCTCAGAAGAGCGGCCCCCTCCAGACTATAGATTTATCATACAATGGGTTGTCT
GGAAGCTTACCTTCTTGGATCAATGAGCAAACTCTGCAATTAAATTTAGTTGGCAACAAC
TTTACAATGGAACAATTAGACAGCAGTTCTCTGCCTTCCGGGTTAGATTGTCTTCAACGA
AACTTCCCTTGCGATCGAGGATCTCCGAGATGGTCCAGCTTTGCAATTAAATGTGGGGGA
CCTCCAATTACATCAAGCAATCAGATATCGTATGAGATGGAGAACCAGACTATGGGTCCA
GCAACATATTTCATGACCAGGACAGGGAGGTGGGCTGTAAGTAATGTTGGTCTGCCTTCT
GACAGTCCAGATCAGGACTTCACAAGCTTCTCCTCATCTCAGTTTACAAACACCTTGGAC
TCGGAGCTCTTCCAAACTGCACGAATTTCCGCAGGATCACTTAGATACTATGGCTTGGGC
CTTGAGAATGGTAATTACACTGTAAACCTCCAATTTGCCGAGTCACAAATCTTAAATCCC
CCAACTTGGCGTAGTCTTGGGAGGCGTGTATTTGACGTATATGTACAGGGAATTCGGGAG
TTGAAAGATTTTGACATACGGAAGGAGGCTGATGGAAGATCCCTTAGAGCTGTTCAAAAG
CAATTTAAAGTTCAGGTTTCTGAAAATCATCTAGAGATACATCTCTTCTGGGCTGGAAAA
GGGACTTGCTGTGTACCTAGACAAGGCACATATGGACCTTCTATATCAGCAATTAGTGCA
ACCCCAGATTTTATTCCCACTGTTAGCAACCAGCCTCCTACTACAAAAAAGAATCAGACT
GGTCTTATTGTGGGCGTTGTTGTTGGTGTTGGAGTCATAAGCTTCATTTCTGTATTTGCT
GTCTATTACCTAATTCAGAAAAGAAAACAGCAACAAGCTCTTGAGGATGAAGAGTTCCTG
GGGATAGATGCTAGACCCTATACTTTCAGCTATTCAGAACTTCGAGCCGCAACTGCTGAC
TTCAATCCTTCTAATAAGCTTGGAGAGGGAGGTTTTGGACCAGTTTACAAGGGTACACTT
GAGGATGGGAGGGTTGTCGCCGTTAAACAACTGTCTGTGGCATCACATCAAGGGAAGAGT
CAGTTTGTGGCAGAGATTGCCACTATATCAGCTGTACAGCACCGTAATCTTGTGAAACTC
TATGGTTGCTGCATCGAGGGAGATAAACGGTCACTTGTTTATGAGTATCTTGAAAACAAG
AGTCTTGATCAAGCACTATTTGAGAGTGGATCTTTATATCTTGACTGGCCAATACGCTTC
CAGATATGCTTGGGAGTGGCAAAGGGTCTGGCGTATCTTCACGAGGAATCTCGGGTTCGT
GTTGTCCATCGAGATGTCAAGGCCAGTAATATTCTGCTTGATTCAGACCTAAACCCAAAA
ATTTCAGATTTCGGGTTGGCAAAACTTTATGATGACAAAAAGACTCATATAAACACTCGT
GTTGCAGGCACAATAGGGTATCTTGCACCAGAATATGCCATGCGCGGACATCTGACAGAA
AAGGCTGATGTGTTTGGCTTCGGAGTTGTAGCTCTAGAGATTGTCAGCGGTAGACCTAAC
TCTGACTCGAGCTTGGAAGAAGAGAGGATCTACCTTCTTGAGTGGGCTTGGCAGCTTCAT
GAGAACAACTGCGAAACTGAACTGGTGGATGCAAATTTATCTGAATTTGATGAAAACGAA
GTGAGAAAAGTAATAGGGATAGCTCTACTATGCACTCAAACATCCCCAGCACTACGACCC
TCAATGTCCCGTGTAATAGCAATGCTTACAGGAGACGCTGAGGTTGCGACTGTAACTTCC
AGACCTGGATACTTGACTGACTGGAAGTTTACTGATACAACGACCTTCATGAGTGATCAT
CATTCTTCTCAAATGCCCAATTCATCAGTGAGTACAAGTACAGCCGCTGATACAAATTAT
TCGCCATCAGGTGCTGACAGACCGATGCTCCATGACATCCTCGGAGAGGGTAGATGA

Peptide Sequence

PEP ID

XP_016449045.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Nicotiana tabacum]
Sequence

MKTAVPWTINGRGFGLSFYSSAVIVMFSLLVEIAVAQRNTTNVATTNPPEARALNFIFQK
WGISATNRWNISGELCSGAAIDSTEIQDFNPAIKCDCSDNNRTLCHITGLRVYAMNVVSE
IPDELWSLNFLNDLNVAQNFLTGTLSPSIANLTRMQWLSIGINALSGELPKELGLLTELK
SFGFGTNNFSGPLPSELGNLTKMTQIYFDSAGVSGPIPLTFAKLQNLDTVWAADNNLTGR
IPDFIGSWSKLTTLRFQGNSFEGPIPASFSNLTSLTDLRISDLSNGSSSLDFLRNMKSLS
KLVLRNNNISGSIPPNIGEYQSLSLLDLSFNNLSGRIPDALFNLSSLTHLFLGDNKLTGV
LPAQKSGPLQTIDLSYNGLSGSLPSWINEQTLQLNLVGNNFTMEQLDSSSLPSGLDCLQR
NFPCDRGSPRWSSFAIKCGGPPITSSNQISYEMENQTMGPATYFMTRTGRWAVSNVGLPS
DSPDQDFTSFSSSQFTNTLDSELFQTARISAGSLRYYGLGLENGNYTVNLQFAESQILNP
PTWRSLGRRVFDVYVQGIRELKDFDIRKEADGRSLRAVQKQFKVQVSENHLEIHLFWAGK
GTCCVPRQGTYGPSISAISATPDFIPTVSNQPPTTKKNQTGLIVGVVVGVGVISFISVFA
VYYLIQKRKQQQALEDEEFLGIDARPYTFSYSELRAATADFNPSNKLGEGGFGPVYKGTL
EDGRVVAVKQLSVASHQGKSQFVAEIATISAVQHRNLVKLYGCCIEGDKRSLVYEYLENK
SLDQALFESGSLYLDWPIRFQICLGVAKGLAYLHEESRVRVVHRDVKASNILLDSDLNPK
ISDFGLAKLYDDKKTHINTRVAGTIGYLAPEYAMRGHLTEKADVFGFGVVALEIVSGRPN
SDSSLEEERIYLLEWAWQLHENNCETELVDANLSEFDENEVRKVIGIALLCTQTSPALRP
SMSRVIAMLTGDAEVATVTSRPGYLTDWKFTDTTTFMSDHHSSQMPNSSVSTSTAADTNY
SPSGADRPMLHDILGEGR

Transcript Sequence

Gene sequence data has not been registered.